hspblast

Thescoreforahitisthescoreofthehighest-scoringHSPthatbelongstothathit.Thee-valueforanHSPiscomputedusingthescore,thedatabasesize,and ...,2020年2月19日—ABLASTruncomprises,amongothersections,a'ranking'ofhitswithone-linesummariesincludingscoringinformation,followedbythesearch ...,IntheBLASTtableviewyoucanhandletheHSPsequences.Selectoneormoresequencesfromthetable,andapplyoneofthefollowingfunctions.,...

參考資訊如下
Core concepts of a BLAST result: Hit, HSP, score, and e

The score for a hit is the score of the highest-scoring HSP that belongs to that hit. The e-value for an HSP is computed using the score, the database size, and ...

BLAST HSP processing rules — MView

2020年2月19日 — A BLAST run comprises, among other sections, a 'ranking' of hits with one-line summaries including scoring information, followed by the search ...

BLAST HSP table

In the BLAST table view you can handle the HSP sequences. Select one or more sequences from the table, and apply one of the following functions.

BLAST Terminology Definitions

2018年6月16日 — all nucleotides not included in the HSP (in BLAST terms, “overhang”) are counted as mismatches. Page 2. Equation Derivation. Below is the ...

High Scoring Pairs (HSP) in BLAST output

2016年9月5日 — A High-scoring Segment Pair (HSP) is a local alignment with no gaps that achieves one of the highest alignment scores in a given search.

BLAST Glossary

2011年7月14日 — A High-scoring Segment Pair (HSP) is a local alignment with no gaps that achieves one of the highest alignment scores in a given search.

Hsp

... HSP in subject pattern-from INTEGER OPTIONAL , -- start of PHI-BLAST pattern pattern-to INTEGER OPTIONAL , -- end of PHI-BLAST pattern query-frame INTEGER ...

BLAST (生物資訊學)

生物信息學中，BLAST（英語：Basic Local Alignment Search Tool）它是一個用來比對生物序列的一級結構（如不同蛋白質的氨基酸序列或不同基因的DNA序列）的算法。

BLAST (生物資訊學)

生物資訊學中，BLAST（英語：Basic Local Alignment Search Tool）它是一個用來比對生物序列的一級結構（如不同蛋白質的胺基酸序列或不同基因的DNA序列）的算法。